Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015887038.1_cds_XP_016441318.1_36693
CDS Infomation

[gene=LOC107766932] [db_xref=GeneID:107766932] [protein=hydroxymethylglutaryl-CoA lyase, mitochondrial-like isoform X1] [protein_id=XP_016441318.1] [location=complement(join(31546..31794,32521..32636,32965..33101,33639..33802,33892..33972,34145..34324,34555..34753,35279..35445))] [gbkey=CDS]
Sequence

ATGTCAAGCTTGGAAGAGCCTCTTAACCTGGACAGGTTGCCAAGTTTGAGCAACATTGAT
TGGCTAGAGAGGTTCTCATCTGGTGCCTGCAGGCCTATAGGAGAAGATATGGCGATAGGG
GACTCCTGGACTGATGGGAGAAGTTGCAGCTCATCCAACAGCTGTGTTGAAGATGATGAC
GAATACGGGAGAGAGAACTTCAAATGGAGAAGACATGGATCACGTAATGGCATCTCAAGT
CGAAGGTCCAAGAGTTTTAGCACTAATTATAGAGTATGTGGAACTTTGTCTCATTCACAG
TACTTGACAGATCATCAATCTAAATCTTACAGAAACAATAGAAGTACAGTGAGTAAACCG
TTCAAGTTGTTCGATGGCATGCCAAAGTATGTGAAGATAGTGGAAGTTGGTCCAAGGGAT
GGGTTACAAAATGAAAAGAATATTGTTCCTACATCAGTGAAGGTTGAATTAGTTCAAAAA
CTTGTCTCTTGCGGGCTACCTGTTGTTGAAGTGACGGGCTTTGTTTCTCCAAAATGGGTA
CCTCAGCTATCGGATGCCAAGGATGTAATGGAGGCAGTGAAGGATCTGGAAAGTGCCAGA
TTGCCTGTATTGACACCTAATATGAAAGGCTTTGAAGCAGCTGTTGCAGCTGGGGCGAAA
GAAGTAGCAGTCTTTGCTTCAGCTTCTGAGTCTTTCTCAAAGTCAAACATTAATTGCAGT
ATTGAGGAGAGCCTTGTCCGATATCGAGCTGTTACTTCTGCTGCCAGAAAACTGTCAATA
CCCGTTCGTGGATATGTATCATGTGCTATTGGGTGTCCAACCGAAGGAGCAATTTCCCCT
TCAAAAGTGGCATATGTAGCAAAGGAACTTCATGACATGGGATGCTTTGAAATCTCCCTT
GGAGACACAATAGGTGTCGCTACTCCAGGATCGGTTGTTCCTATGCTTGAAGCTGTGATG
GCTGTGGTTCCTGTTGAAAAGCTTGCTGTGCATTTCCACGATACCTATGGACAGTCTCTT
TCTAATATTTTAGTTTCCCTCCAAATGGGTATTAGCACAGTAGACTCGTCTGTTGCTGGA
CTCGGAGGCTGTCCATACGCCAAAGGAGCAACTGGCAATGTTTCAACAGAAGATGTTGTC
TATATGCTTAACGGTCTAGGGATAAAAACCAACGTCGATATACAAAAGCTCTTGCTAGCC
GGAGAGTTCATCAGCAAGTATTTGGACCGTCCATCCGGATCTAAAGCAGCCATTGCTTTG
AGCAGAGTCACAGCAGATGCATCCAAGATATAG

Peptide Sequence

PEP ID

XP_016441318.1
PEP Infomation

PREDICTED: hydroxymethylglutaryl-CoA lyase, mitochondrial-like isoform X1 [Nicotiana tabacum]
Sequence

MSSLEEPLNLDRLPSLSNIDWLERFSSGACRPIGEDMAIGDSWTDGRSCSSSNSCVEDDD
EYGRENFKWRRHGSRNGISSRRSKSFSTNYRVCGTLSHSQYLTDHQSKSYRNNRSTVSKP
FKLFDGMPKYVKIVEVGPRDGLQNEKNIVPTSVKVELVQKLVSCGLPVVEVTGFVSPKWV
PQLSDAKDVMEAVKDLESARLPVLTPNMKGFEAAVAAGAKEVAVFASASESFSKSNINCS
IEESLVRYRAVTSAARKLSIPVRGYVSCAIGCPTEGAISPSKVAYVAKELHDMGCFEISL
GDTIGVATPGSVVPMLEAVMAVVPVEKLAVHFHDTYGQSLSNILVSLQMGISTVDSSVAG
LGGCPYAKGATGNVSTEDVVYMLNGLGIKTNVDIQKLLLAGEFISKYLDRPSGSKAAIAL
SRVTADASKI

Transcript Sequence

Gene sequence data has not been registered.